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Datasets (5)

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  • KEYWORDS Bioinformatics
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PathoSeq-QC analyses of A(H5N1) and Oropouche viruses

This dataset contains the results produced by running PathoSeq-QC v.2 (with default parameters) on a sample of A(H5N1) virus (Run ID: SRR29851702) and a sample of Oropouche virus (Run ID: SRR14711849). The A(H5N1) virus reference sequence used for the H5N1 ana...

DWN
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AMPLICON dataset from 9 SARS-CoV-2 representative sequences

This dataset comprises > 100 paired-end whole genome sequencing (WGS) data generated from nine representative SARS-CoV-2 sequences (IDs: LR991699,MW617687,MW763128,MW972888,OD913776,OM873778,OM898676,OU015160,OV754178) obtained from the COVID-19 data portal (h...

DWN
Last updated: | Recent visits: 2
GMO-Amplicon sources

Sequence dataset of putative GMO-related sequences, obtained by PCR simulation screening of public nucleotide sequence databanks, including patents and available whole plant genomes, as described in "JRC GMO-Amplicons: a collection of nucleic acid sequences re...

PUB
DWN
Last updated: | Recent visits: 3
GMO-Amplicons

Non redundant sequence dataset of amplicons collected by screening public nucleotide sequence databanks by in silico determination of PCR amplification with reference methods for GMO analysis, as described in "JRC GMO-Amplicons: a collection of nucleic acid se...

PUB
DWN