Description
The dataset includes 16S and ITS raw DNA sequences for 885 samples collected as part of LUCAS 2018 Soil survey2,3 for the biodiversity module. Raw DNA sequences are deposited on NCBI Sequence Read Archive (SRA) database under BioProject ID PRJNA952168. Samples from four locations were re-sampled, and thus sequenced twice, due to sampling issues (i.e., 885 total samples from 881 sampling sites): samples n° 59, 102, 113, 116 were re-sequenced as samples n° 138, 601, 717, 258 respectively.
Contact
Contributors
-
- European Commission, Joint Research Centre
- https://ec.europa.eu/info/departments/joint-research-centre
How to cite
European Commission, Joint Research Centre (JRC) (2023): Soil biodiversity - DNA Bacteria and Fungi. European Commission, Joint Research Centre (JRC) [Dataset] PID: http://data.europa.eu/89h/de9956db-9167-4cc0-a038-34292fe529cf
Data access
TThe dataset includes 16S and ITS raw DNA sequences for 885 samples collected as part of LUCAS 2018 Soil survey2,3 for the biodiversity module. Raw DNA sequences are deposited on NCBI Sequence Read Archive (SRA) database under BioProject ID PRJNA952168. Samples from four locations were re-sampled, and thus sequenced twice, due to sampling issues (i.e., 885 total samples from 881 sampling sites): samples n° 59, 102, 113, 116 were re-sequenced as samples n° 138, 601, 717, 258 respectively.
Publications
Additional information
- Published by
- European Commission, Joint Research Centre
- Created date
- 2023-06-23
- Modified date
- 2023-06-23
- Issued date
- 2023-02-16
- Landing page
- https://esdac.jrc.ec.europa.eu/content/soil-biodiversity-dna-bacteria-and-fungi
- Language(s)
- English
- Data theme(s)
- Environment
- Update frequency
- never
- Identifier
- http://data.europa.eu/89h/de9956db-9167-4cc0-a038-34292fe529cf
- Popularity
-